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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs72859868 chr2:132206187 A/G CCDC74B chr2:130896860-130902707:- 0.37 6.65 8.04E-11 Box Plot
THCA rs7286137 chr22:24045645 C/T IGLL3 chr22:25713888-25716191:+ 0.69 9.87 4.94E-21 Box Plot
THCA rs7286782 chr22:34290257 A/G CHKB-CPT1B chr22:51007298-51021394:- 0.34 5.93 5.95E-9 Box Plot
THCA rs7286782 chr22:34290257 A/G CYTSA chr22:24666786-24813707:+ 0.47 6.31 6.34E-10 Box Plot
THCA rs7286782 chr22:34290257 A/G EIF4ENIF1 chr22:31832963-31892094:- 0.69 7.2 2.32E-12 Box Plot
THCA rs7286782 chr22:34290257 A/G FAM10A4 chr13:50746154-50747749:+ 0.54 6.05 3.0E-9 Box Plot
THCA rs7286782 chr22:34290257 A/G GGA1 chr22:38004482-38029571:+ 0.53 5.94 5.62E-9 Box Plot
THCA rs7286782 chr22:34290257 A/G HPS4 chr22:26839389-26879803:- 0.58 6.12 1.9E-9 Box Plot
THCA rs7286782 chr22:34290257 A/G KLHL22 chr22:20795806-20850170:- 0.69 7.64 1.2E-13 Box Plot
THCA rs7286782 chr22:34290257 A/G LOC150381 chr22:46449726-46454400:+ 0.54 6.38 4.27E-10 Box Plot
THCA rs7286782 chr22:34290257 A/G MED15 chr22:20850200-20941919:+ 0.41 5.94 5.47E-9 Box Plot
THCA rs7286782 chr22:34290257 A/G NIPSNAP1 chr22:29950797-29977326:- 0.73 6.55 1.48E-10 Box Plot
THCA rs7286782 chr22:34290257 A/G PATZ1 chr22:31721790-31742218:- 0.51 6.27 7.87E-10 Box Plot
THCA rs7286782 chr22:34290257 A/G PICK1 chr22:38452318-38471708:+ 0.53 5.94 5.54E-9 Box Plot
THCA rs7286782 chr22:34290257 A/G PLA2G6 chr22:38507502-38601697:- 0.38 6.57 1.32E-10 Box Plot